miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Mus musculus, Mus musculus



ABOUT THIS RECORD

ID: MNEST004948
species: Mus musculus
miRNA family: miR-682
source: miRNEST

Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTGCAGTCACAGTGAAGTCTG

miRNA*
 GATGTATACTGTGGCCCGTGGGG

mismatches: 4
bulges: 2
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pre-miRNA
 CGGATGTATACTGTGGCCCGTGGGGCCTGGACCTACAACACCACCTCTGCAGTCACAGTGAAGTCTGCCATCAGAAGACTGAAGGAACTGAAAGAC

dot-bracket secondary structure
)((((...(((((((((..((((((..(((..........))).)))))).)))))))))..)))).((.((((....)))).))...........


SIMILARITIES
miRBase mmu-mir-682: 1.0E-21

PMRD no hits

microPC no hits		UniProt sp|P61515|RL37P_RAT: 1.0E-8

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: not a miRNA
Source sequences
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