ABOUT THIS RECORDspecies: Mus musculus
miRNA family: miR-682
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTGCAGTCACAGTGAAGTCTG miRNA* GATGTATACTGTGGCCCGTGGGG mismatches: 4 bulges: 2 |
pre-miRNA
GGATGTATACTGTGGCCCGTGGGGCCTGGACCTACAACACCACCTCTGCAGTCACAGTGAAGTCTGCCATCAGAAGACTGAAGGAACTGAAAGAC
dot-bracket secondary structure
((((...(((((((((..((((((..(((..........))).)))))).)))))))))..)))).((.((((....)))).))...........
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: not a miRNA
Source sequences
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GGATGTATACTGTGGCCCGTGGGGCCTGGACCTACAACACCACCTCTGCAGTCACAGTGAAGTCTGCCATCAGAAGACTGAAGGAACTGAAAGAC
dot-bracket secondary structure
((((...(((((((((..((((((..(((..........))).)))))).)))))))))..)))).((.((((....)))).))...........
SIMILARITIES| miRBase mmu-mir-682: 1e-21 PMRD no hits microPC no hits | UniProt sp|P61515|RL37P_RAT: 0.00000001 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: not a miRNA
Source sequences
download this record
