ABOUT THIS RECORDspecies: Mus musculus
miRNA family: miR-3473
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGAGAGATGGCTCAGCAATT miRNA* TTCCTGAGTTCAATTCCCAGC mismatches: 2 bulges: 2 |
pre-miRNA
AAAATAAGCAAACATCTGGGCTGGAGAGATGGCTCAGCAATTAAGAGCACTGGTTGCCCTTCCCGAGTTCCTGAGTTCAATTCCCAGCAACCACATGATG
GCTCAC
dot-bracket secondary structure
......(((...(((.((((((((.(((.((((((((.(((((((.(((.....))).)))....)))).))))).))).))))))))..))).)))...
)))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AAAATAAGCAAACATCTGGGCTGGAGAGATGGCTCAGCAATTAAGAGCACTGGTTGCCCTTCCCGAGTTCCTGAGTTCAATTCCCAGCAACCACATGATG
GCTCAC
dot-bracket secondary structure
......(((...(((.((((((((.(((.((((((((.(((((((.(((.....))).)))....)))).))))).))).))))))))..))).)))...
)))...
SIMILARITIES| miRBase mmu-mir-3473c: 0.00002 PMRD no hits microPC no hits | UniProt no hits RFAM tRNA: 0.00000000000003 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
