ABOUT THIS RECORDspecies: Oryza sativa
miRNA family: MIRf261
source: PMRD, original name: osa-miRf10759-akr
Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGCTGGAGCTCAGCCAAACAG miRNA* GTTTGGCACAGCTCTAGCTCC mismatches: 2 bulges: 0 |
pre-miRNA
GGAGCTAAGGGCCTGTTTGGCACAGCTCTAGCTCCAACTCCACCCCTCCTGGAGCTGGAGCTCAGCCAAACAGTTTCAGCTCC
dot-bracket secondary structure
((((((..((..(((((((((..(((((((((((((.............)))))))))))))..)))))))))..))))))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
GGAGCTAAGGGCCTGTTTGGCACAGCTCTAGCTCCAACTCCACCCCTCCTGGAGCTGGAGCTCAGCCAAACAGTTTCAGCTCC
dot-bracket secondary structure
((((((..((..(((((((((..(((((((((((((.............)))))))))))))..)))))))))..))))))))
SIMILARITIES| miRBase no hits PMRD osa-miRf11003-akr: 9e-35 microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
