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Species belonging to selected taxon:

Mus musculus, Rattus norvegicus, Peromyscus maniculatus bairdii, Peromyscus polionotus subgriseus



ABOUT THIS RECORD

ID: MNEST004998
species: Mus musculus
miRNA family: miR-1938
source: miRNEST

Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CGGTGGGACTTGTAGTTCGGTC

miRNA*
 CTGAACTGCAGTTCCCATCATG

mismatches: 2
bulges: 0
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pre-miRNA
 GGCCTGGGGCGCGGTGGGACTTGTAGTTCGGTCTTCGCTTCGGACGCCCAAGTCTGCATAGCGCGTGGTACGGCTGAACTGCAGTTCCCATCATGCCCTG
NGA

dot-bracket secondary structure
.....((((((.(((((((.(((((((((((((..((((.(((((......)))))...))))........))))))))))))).))))))).)))))).
...


SIMILARITIES
miRBase mmu-mir-1938: 3e-50

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets
Source sequences
download this record
deep sequencing data evidence




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