ABOUT THIS RECORDspecies: Mus musculus
miRNA family: miR-1938
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CGGTGGGACTTGTAGTTCGGTC miRNA* CTGAACTGCAGTTCCCATCATG mismatches: 2 bulges: 0 |
pre-miRNA
GGCCTGGGGCGCGGTGGGACTTGTAGTTCGGTCTTCGCTTCGGACGCCCAAGTCTGCATAGCGCGTGGTACGGCTGAACTGCAGTTCCCATCATGCCCTG
NGA
dot-bracket secondary structure
.....((((((.(((((((.(((((((((((((..((((.(((((......)))))...))))........))))))))))))).))))))).)))))).
...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
Source sequences
download this record
deep sequencing data evidence
GGCCTGGGGCGCGGTGGGACTTGTAGTTCGGTCTTCGCTTCGGACGCCCAAGTCTGCATAGCGCGTGGTACGGCTGAACTGCAGTTCCCATCATGCCCTG
NGA
dot-bracket secondary structure
.....((((((.(((((((.(((((((((((((..((((.(((((......)))))...))))........))))))))))))).))))))).)))))).
...
SIMILARITIES| miRBase mmu-mir-1938: 3e-50 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets
Source sequences
download this record
deep sequencing data evidence
