ABOUT THIS RECORDspecies: Mus musculus
miRNA family: mir-22
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGTTCTTCACTGGCAAGCTTT miRNA* AGCTGCCAGTTGAAGAACTGT mismatches: 0 bulges: 2 |
pre-miRNA
ACTCCCACACCCTCACCTGGCTGAGCCGCAGTAGTTCTTCACTGGCAAGCTTTATGTCCTGACCCAGCTAAAGCTGCCAGTTGAAGAACTGTTGCCCTCTG
CCCCTGGCTTCGTGGAGGA
dot-bracket secondary structure
).(((..(((.....((.(((.(((..((((((((((((((((((((.((((((....(((...))).)))))))))))).)))))))))))))).))).)
))...))....)))..)))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ACTCCCACACCCTCACCTGGCTGAGCCGCAGTAGTTCTTCACTGGCAAGCTTTATGTCCTGACCCAGCTAAAGCTGCCAGTTGAAGAACTGTTGCCCTCTG
CCCCTGGCTTCGTGGAGGA
dot-bracket secondary structure
).(((..(((.....((.(((.(((..((((((((((((((((((((.((((((....(((...))).)))))))))))).)))))))))))))).))).)
))...))....)))..)))
SIMILARITIES| miRBase mmu-mir-22: 2.0E-46 PMRD no hits microPC no hits | UniProt no hits RFAM 2mir-22: 3.0E-39 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
