miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Mus musculus
,
Rattus norvegicus
,
Peromyscus maniculatus bairdii
,
Cavia porcellus
,
Peromyscus polionotus subgriseus
ABOUT THIS RECORD
ID:
MNEST005024
species:
Mus musculus
miRNA family:
miR-1954
source:
miRNEST
Taxonomy by NCBI:
Mus musculus
Mus
Mus
Murinae
Muridae
Muroidea
Sciurognathi
Rodentia
Glires
Euarchontoglires
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CCTGCAGAGTGAGACCCTGTG
miRNA*
CAGGGTTTCACTCTGTGGCT
mismatches:
0
bulges:
1
View larger
pre-miRNA
AGTCAGCTTGG
CCTGCAGAGTGAGACCCTGTG
TTAGACCAATGGAGGGGTGGGGAGAACAGAATCCTGTAGCA
CAGGGTTTCACTCTGTGGCT
GCAGCCC
A
dot-bracket secondary structure
.....((((((
((.((((((((((((((((((
(((.(((........))).((((........)))).)))))
))))))))))))))))))))
).)))..
.
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record