miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Mus musculus, Rattus norvegicus, Peromyscus maniculatus bairdii, Oryctolagus cuniculus, Cavia porcellus, Peromyscus polionotus subgriseus



ABOUT THIS RECORD

ID: MNEST005031
species: Mus musculus
miRNA family: miR-147
source: miRNEST

Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGGAAACATTTTTGCACAAAC

miRNA*
 CTGCGGAAATCCTTCTGNT

mismatches: 3
bulges: 2
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pre-miRNA
 AAGAACATTCTACGAATTTAGTGGAAACATTTTTGCACAAACTAGATGTCCATGCCAGTCTGCGGAAATCCTTCTGNTACATTTGTACGGTTTCCC

dot-bracket secondary structure
..((((....(((((((.((.(((((..(((((((((...(((.............))).)))))))))..))))).)).)))))))..))))...


SIMILARITIES
miRBase mmu-mir-147: 2e-20

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-147: 0.000001		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
download this record




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