ABOUT THIS RECORDspecies: Mus musculus
miRNA family: miR-147
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGAAACATTTTTGCACAAAC miRNA* CTGCGGAAATCCTTCTGNT mismatches: 3 bulges: 2 |
pre-miRNA
CAAGAACATTCTACGAATTTAGTGGAAACATTTTTGCACAAACTAGATGTCCATGCCAGTCTGCGGAAATCCTTCTGNTACATTTGTACGGTTTCCC
dot-bracket secondary structure
)..((((....(((((((.((.(((((..(((((((((...(((.............))).)))))))))..))))).)).)))))))..))))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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CAAGAACATTCTACGAATTTAGTGGAAACATTTTTGCACAAACTAGATGTCCATGCCAGTCTGCGGAAATCCTTCTGNTACATTTGTACGGTTTCCC
dot-bracket secondary structure
)..((((....(((((((.((.(((((..(((((((((...(((.............))).)))))))))..))))).)).)))))))..))))...
SIMILARITIES| miRBase mmu-mir-147: 2.0E-20 PMRD no hits microPC no hits | UniProt no hits RFAM 7mir-147: 1.0E-6 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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