ABOUT THIS RECORDspecies: Mus musculus
miRNA family: let-7
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTATACAATCTACTGTCTTTC miRNA* TGAGGTAGTAGGTTGTATGGTT mismatches: 1 bulges: 0 |
pre-miRNA
CACGGCCTTTGGGGTGAGGTAGTAGGTTGTATGGTTTTGGGCTCTGCCCCGCTCTGCGGTAACTATACAATCTACTGTCTTTCCTGAAGTGGC
dot-bracket secondary structure
)...((((((.(((.(((((((((((((((((((((..((((...))))(((...)))..))))))))))))))))))))).))).))).)))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
additional data
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CACGGCCTTTGGGGTGAGGTAGTAGGTTGTATGGTTTTGGGCTCTGCCCCGCTCTGCGGTAACTATACAATCTACTGTCTTTCCTGAAGTGGC
dot-bracket secondary structure
)...((((((.(((.(((((((((((((((((((((..((((...))))(((...)))..))))))))))))))))))))).))).))).)))
SIMILARITIES| miRBase mmu-let-7c-2: 3.0E-47 PMRD no hits microPC no hits | UniProt no hits RFAM 7let-7: 6.0E-24 | most similar mature miRNAs |
Identical with: mmu-let-7c-2 from miRBase (MNEST031756), rno-let-7c-2 from miRBase |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
additional data
download this record
