ABOUT THIS RECORDspecies: Mus musculus
miRNA family: miR-709
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGAGGCAGAGGCAGGAGGA miRNA* CTCAAGTTCAATGTCTGTCT mismatches: 5 bulges: 1 |
pre-miRNA
TTGAAACAGAAGGTTCTCAAGTTCAATGTCTGTCTAGGCTATAGAGGGAGTTCAAGGCCAGCCTGGGTGTTTTAGGGAGCCCTCTCTCAAAAAGTAAGGAG
ATACCCAGTCAGGGATGGTGTACCCTTTGATCTCAGCACTGGGGAGGCAGAGGCAGGAGGATCTCTGAGTGT
dot-bracket secondary structure
).....((((.(((((((..(((...(((((.((((((((.(((((((...(((...((...((((((((((((((((....)))))...........)))
))))))))....)).)))....))))))).....))).))))).)))))..)))..))))))))))).....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
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TTGAAACAGAAGGTTCTCAAGTTCAATGTCTGTCTAGGCTATAGAGGGAGTTCAAGGCCAGCCTGGGTGTTTTAGGGAGCCCTCTCTCAAAAAGTAAGGAG
ATACCCAGTCAGGGATGGTGTACCCTTTGATCTCAGCACTGGGGAGGCAGAGGCAGGAGGATCTCTGAGTGT
dot-bracket secondary structure
).....((((.(((((((..(((...(((((.((((((((.(((((((...(((...((...((((((((((((((((....)))))...........)))
))))))))....)).)))....))))))).....))).))))).)))))..)))..))))))))))).....
SIMILARITIES| miRBase mmu-mir-709: 2.0E-9 PMRD no hits microPC no hits | UniProt no hits RFAM K7SK: 3.0E-6 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
download this record
