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Species belonging to selected taxon:
Oryza sativa
ABOUT THIS RECORD
ID:
MNEST050767
species:
Oryza sativa
source:
PMRD, original name:
osa-miRf11552-akr
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GGCTCACCATTGCAGGAGGAA
miRNA*
CCTCTTGCATGCTGAGCTCG
mismatches:
2
bulges:
1
View larger
pre-miRNA
ACG
GGCTCACCATTGCAGGAGGAA
TGGTCGGCTGGGGATCATTGGACTGATGTGCGGCCATGCGTTCATCAACCTTCCTTGCCACCT
CCTCTTGCATGCT
GAGCTCG
T
dot-bracket secondary structure
(((
((((((.(((.(((((((((.
.(((.(((.(((((.....((..(((((.(((......))).))))).)).))))))))))))
))))))))))).)
)))))))
)
SIMILARITIES
miRBase
no hits
PMRD
osa-miRf11707-akr
:
2e-54
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record