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Species belonging to selected taxon:
Oryza sativa
ABOUT THIS RECORD
ID:
MNEST050771
species:
Oryza sativa
source:
PMRD, original name:
osa-miRf11556-akr
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CGGTCCTTGAGGAGGTACCATGA
miRNA*
ATGGTACCTCCTCAAGGACCGTA
mismatches:
0
bulges:
0
View larger
pre-miRNA
AGCAATTTTA
CGGTCCTTGAGGAGGTACCATGA
GGTATCACTTTTTTTATTGTAAATTTGGTACCTCTTGGTACCTAGGTACTATGAGATACCATGAGAT
ACCAAATTTTACACTATATTTTTGGTACCTC
ATGGTACCTCCTCAAGGACCGTA
GAATTGCT
dot-bracket secondary structure
((((((((((
(((((((((((((((((((((((
(((((((.......((.(((((((((((((.(((.(((((.((..........)).))))).))).)
)))))).)))))).))......)))))))))
)))))))))))))))))))))))
))))))))
SIMILARITIES
miRBase
no hits
PMRD
osa-miRf11555-akr
:
3e-76
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
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