ABOUT THIS RECORDspecies: Mus musculus
miRNA family: mir-671
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGGAAGCCCTGGAGGGGCTGGAG miRNA* CCGGGTTCTCAGGGCTCCACC mismatches: 2 bulges: 2 |
pre-miRNA
ACTGCCAACGCCAGGAAGAGGAGGAAGCCCTGGAGGGGCTGGAGTTGATGAATGTTTTCCTCCGGGTTCTCAGGGCTCCACCTCTTTCGACCCTTAGAGC
dot-bracket secondary structure
...((....))..((((((((.(((.((((((.((((.((((((..(((....)))...)))))).))))))))))))).))))))))............
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
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ACTGCCAACGCCAGGAAGAGGAGGAAGCCCTGGAGGGGCTGGAGTTGATGAATGTTTTCCTCCGGGTTCTCAGGGCTCCACCTCTTTCGACCCTTAGAGC
dot-bracket secondary structure
...((....))..((((((((.(((.((((((.((((.((((((..(((....)))...)))))).))))))))))))).))))))))............
SIMILARITIES| miRBase mmu-mir-671: 3e-32 PMRD no hits microPC no hits | UniProt no hits RFAM mir-671: 3e-23 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
download this record
