ABOUT THIS RECORDspecies: Oryza sativa
source: PMRD, original name: osa-miRf11658-akr
Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGGTGTCTTTGCTGGTGGCC miRNA* CCGCCAGCGAAGATACCTAC mismatches: 1 bulges: 0 |
pre-miRNA
GAAGATGTAGGTGTCTTTGCTGGTGGCCCTCTTAACTTAACGTCAGCGAAGATATCTTAACTTAACGCCAATCTTCGCTAGCGGTGTGGTGACGTGGACC
GCCAGCGAAGATACCTACATCTTC
dot-bracket secondary structure
((((((((((((((((((((((((((.((.(...(((...((..(((((((((.................)))))))))..))....)))...).)).))
))))))))))))))))))))))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
GAAGATGTAGGTGTCTTTGCTGGTGGCCCTCTTAACTTAACGTCAGCGAAGATATCTTAACTTAACGCCAATCTTCGCTAGCGGTGTGGTGACGTGGACC
GCCAGCGAAGATACCTACATCTTC
dot-bracket secondary structure
((((((((((((((((((((((((((.((.(...(((...((..(((((((((.................)))))))))..))....)))...).)).))
))))))))))))))))))))))))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
