ABOUT THIS RECORDspecies: Oryza sativa
source: PMRD, original name: osa-miRf11664-akr
Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGAGCTAGAGCTGTGCCAAA miRNA* TGGCACAGCTCCGGCTCTAT mismatches: 2 bulges: 0 |
pre-miRNA
TCTGGACCGTTTGGCACAGCTCCGGCTCTATATAAGTTGGAGTTGGGAGCTAGAGCTGTGCCAAACCGGCCCAGA
dot-bracket secondary structure
(((((.((((((((((((((((..(((((..((........))..)))))..))))))))))))).))).)))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
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TCTGGACCGTTTGGCACAGCTCCGGCTCTATATAAGTTGGAGTTGGGAGCTAGAGCTGTGCCAAACCGGCCCAGA
dot-bracket secondary structure
(((((.((((((((((((((((..(((((..((........))..)))))..))))))))))))).))).)))))
SIMILARITIES| miRBase no hits PMRD osa-miRf11663-akr: 3e-37 microPC no hits | UniProt no hits RFAM no hits |
Identical with: osa-miRf11663-akr from PMRD (MNEST050878) |
MOREmiRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
download this record
