miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Oryza sativa
ABOUT THIS RECORD
ID:
MNEST050896
species:
Oryza sativa
source:
PMRD, original name:
osa-miRf11681-akr
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GGATGAGGATGTGGCATCCT
miRNA*
GATGCTATGTCCTCATCCTA
mismatches:
0
bulges:
0
View larger
pre-miRNA
TGTTCCATTA
GGATGAGGATGTGGCATCCT
ATTAATTTCGTGCGATGGCTGGTAATAG
GATGCTATGTCCTCATCCTA
GGTGAAACA
dot-bracket secondary structure
.(((.(((((
((((((((((((((((((((
((((...(((.((....)))))))))))
))))))))))))))))))))
.))).))).
SIMILARITIES
miRBase
osa-MIR807b
:
2e-20
PMRD
osa-miRf10699-akr
:
1e-33
microPC
miR807
:
9e-29
UniProt
no hits
RFAM
MIR807: 7e-36
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record