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Species belonging to selected taxon:
Agrostis stolonifera
,
Oryza sativa
,
Avena barbata
,
Avena sativa
,
Festuca arundinacea
,
Festuca pratensis
,
Hordeum vulgare
,
Hordeum vulgare subsp. spontaneum
,
Leymus cinereus x Leymus triticoides
,
Lolium perenne
,
Pseudoroegneria spicata
,
Triticum monococcum
,
Triticum turgidum subsp. durum
,
Brachypodium distachyon
,
Triticum aestivum
ABOUT THIS RECORD
ID:
MNEST050897
species:
Oryza sativa
source:
PMRD, original name:
osa-miRf11682-akr
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ACGTAAAGTCAGAGGGACGTGG
miRNA*
ATGTCCCTATGACTTTACGTCA
mismatches:
3
bulges:
0
View larger
pre-miRNA
CTCCTCTA
ACGTAAAGTCAGAGGGACGTGG
GTCACTGATGTGTGGGCCTAACCTTTGTGGGTCTCACATGTTAGTGACA
ATGTCCCTATGACTTTACGTC
A
GAGGAG
dot-bracket secondary structure
(((((((.
(((((((((((.((((((((..
((((((((((((((((((((.......)))))).)))))))))))))).
)))))))).))))))))))).
)
))))))
SIMILARITIES
miRBase
no hits
PMRD
osa-miRf12024-akr
:
0.000000000001
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record