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Species belonging to selected taxon:
Oryza sativa
ABOUT THIS RECORD
ID:
MNEST050899
species:
Oryza sativa
source:
PMRD, original name:
osa-miRf11684-akr
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CCGGTTGATAATACCAACCGG
miRNA*
GGTTGGTAATACCAACCGGGA
mismatches:
2
bulges:
0
View larger
pre-miRNA
TTTAATCCC
GGTTGGTAATACCAACCGGGA
CTAAAAATCATCTTTACTCTCGGTTCATCCCGTGTCAGTAGTCTGTCAGGGGGCCGAGGATCTTTAGTC
C
CGGTTGATAATACCAACCGG
GACTAAA
dot-bracket secondary structure
.(((.((((
((((((((.((.(((((((((
(((((.(((.........((((((....(((.((.(((....))).)).)))))))))))).)))))))
)
)))))).)).))))))))))
)).))).
SIMILARITIES
miRBase
no hits
PMRD
osa-miRf11683-akr
:
5e-68
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
osa-miRf11683-akr
from PMRD (
MNEST050898
)
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
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