ABOUT THIS RECORDspecies: Mus musculus
miRNA family: mir-101
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TACAGTACTGTGATAACTGA miRNA* AGTTATCACAGTGCTGATGCT mismatches: 0 bulges: 1 |
pre-miRNA
GACTGACAGGCTGCCCTGGCTCAGTTATCACAGTGCTGATGCTGTCCATTCTAAAGGTACAGTACTGTGATAACTGAAGGATGGCAGCCATCTTGC
dot-bracket secondary structure
........(((((((((...((((((((((((((((((.((((............)))))))))))))))))))))).))..))))))).......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GACTGACAGGCTGCCCTGGCTCAGTTATCACAGTGCTGATGCTGTCCATTCTAAAGGTACAGTACTGTGATAACTGAAGGATGGCAGCCATCTTGC
dot-bracket secondary structure
........(((((((((...((((((((((((((((((.((((............)))))))))))))))))))))).))..))))))).......
SIMILARITIES| miRBase mmu-mir-101a: 7e-42 PMRD no hits microPC no hits | UniProt no hits RFAM mir-101: 1e-28 | most similar mature miRNAs |
Identical with: sla-mir-101 from miRBase (MNEST027611) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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