ABOUT THIS RECORDspecies: Aquilegia formosa x Aquilegia pubescens
miRNA family: MIR414
source: miRNEST
Taxonomy by NCBI:
Aquilegia formosa x Aquilegia pubescens Aquilegia Ranunculaceae Ranunculales stem eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCATCATCATCATCATCATCT miRNA* ATACATGATGGATATGATT mismatches: 4 bulges: 2 |
pre-miRNA
TCACCATGTCTTCATCATCATCATCATCATCTTCATCTTATGATCTATCTTCCTTCAAATTTGAACCAATTAAGGAATCCATTGTATCACGTGAGATGAC
TCGCAGATACATGATGGATATGATTACATATGC
dot-bracket secondary structure
.....((((..((((..(((((((....((((((((((((((((.((..((((((..((((......)))))))))).....)).))))..)))))))).
....))))..)))))))..))))..))))....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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TCACCATGTCTTCATCATCATCATCATCATCTTCATCTTATGATCTATCTTCCTTCAAATTTGAACCAATTAAGGAATCCATTGTATCACGTGAGATGAC
TCGCAGATACATGATGGATATGATTACATATGC
dot-bracket secondary structure
.....((((..((((..(((((((....((((((((((((((((.((..((((((..((((......)))))))))).....)).))))..)))))))).
....))))..)))))))..))))..))))....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|O23787|THI4_CITSI: 0.0000009 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
