miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Mus musculus, Rattus norvegicus, Peromyscus maniculatus bairdii, Peromyscus polionotus subgriseus



ABOUT THIS RECORD

ID: MNEST005101
species: Mus musculus
miRNA family: miR-1958
source: miRNEST

Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TAGGAAAGTGGAAGCAGTAAGT

miRNA*
 TTACTGCTTCCACTTTCCTATA

mismatches: 0
bulges: 0
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pre-miRNA
 TCACGGAACCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGAATGCAGTTAGAAATTAAACTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGC
TCATCA

dot-bracket secondary structure
.....((.((((((((((((((((((((((((((((((((((((...................)))))))))))))))))))))))))))))))))))).
))....


SIMILARITIES
miRBase mmu-mir-1958: 4e-50

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

Identical with: mmu-mir-1958 from miRBase (MNEST032463)

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
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deep sequencing data evidence




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