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Species belonging to selected taxon:
Mus musculus
,
Sus scrofa
,
Bos taurus
,
Rattus norvegicus
,
Gallus gallus
,
Canis lupus familiaris
,
Ovis aries
,
Macaca fascicularis
,
Anolis carolinensis
,
Trichosurus vulpecula
,
Papio anubis
,
Homo sapiens
,
Taeniopygia guttata
,
Peromyscus maniculatus bairdii
,
Pongo abelii
,
Ursus americanus
,
Equus caballus
,
Oryctolagus cuniculus
,
Macaca nemestrina
,
Cavia porcellus
,
Bos indicus
,
Meleagris gallopavo
,
Lonchura striata domestica
,
Bos sp.
,
Macropus eugenii
,
Peromyscus polionotus subgriseus
,
Capra hircus
,
Pan troglodytes verus
,
Macaca mulatta
ABOUT THIS RECORD
ID:
MNEST005105
species:
Mus musculus
miRNA family:
miR-1946a
source:
miRNEST
Taxonomy by NCBI:
Mus musculus
Mus
Mus
Murinae
Muridae
Muroidea
Sciurognathi
Rodentia
Glires
Euarchontoglires
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GGCCGGGCAGTGGTGGCACAC
miRNA*
TTGAGTCCAGCCTGGTCTA
mismatches:
4
bulges:
2
View larger
pre-miRNA
AAGTAATTTGA
GGCCGGGCAGTGGTGGCACAC
GCCTTTAATCTCAGCACTTGGGAGGCAGAGGTAGGCAGATTTCTGAGT
TTGAGTCCAGCCTGGTCTA
C
AGAGTGA
dot-bracket secondary structure
......(((((
((((((((..(((...((.((
((((((..(((((.....)))))...))))))...(((....))).))
.))...)))))))))))).
)
)))....
SIMILARITIES
miRBase
mmu-mir-3470b
:
0.000000000006
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
Metazoa_SRP: 0.000001
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record