ABOUT THIS RECORDspecies: Mus musculus
miRNA family: miR-3112
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACATAGAAAAGGCAGTCTGCA miRNA* CAGTTTGTCTCTTCTTTGTCT mismatches: 3 bulges: 0 |
pre-miRNA
ATCACAACATCTAAATGAACAGTGACATAGAAAAGGCAGTCTGCATTTATTCTGGAGCTGCAGTTTGTCTCTTCTTTGTCTCTGTCAGTTGGTTTGCTCCA
dot-bracket secondary structure
)......((.((((.(((.(((.((((.((((.((((((.(((((.((.......)).))))).)))))).)))).)))).)))))).))))..)).....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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deep sequencing data evidence
ATCACAACATCTAAATGAACAGTGACATAGAAAAGGCAGTCTGCATTTATTCTGGAGCTGCAGTTTGTCTCTTCTTTGTCTCTGTCAGTTGGTTTGCTCCA
dot-bracket secondary structure
)......((.((((.(((.(((.((((.((((.((((((.(((((.((.......)).))))).)))))).)))).)))).)))))).))))..)).....
SIMILARITIES| miRBase mmu-mir-3112: 3.0E-41 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: mmu-mir-3112 from miRBase (MNEST032571) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
deep sequencing data evidence
