ABOUT THIS RECORDspecies: Mus musculus
miRNA family: miR-103
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGCTTCTTTACAGTGCTGCCT miRNA* CAGCATTGTACAGGGCTATGA mismatches: 4 bulges: 1 |
pre-miRNA
CCACCTCAGCAGAGCTGTCTTCGTGCTTTCAGCTTCTTTACAGTGCTGCCTTGTAGCATTCAGGTCAAGCAGCATTGTACAGGGCTATGAAAGAACCAAG
AATGGGCTGCCCTTAGG
dot-bracket secondary structure
...(((.((...((((.((((.((.((((((..((((.(((((((((((.(((..((......)))))))))))))))).))))...)))))).)).)))
)...))))...)).)))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
CCACCTCAGCAGAGCTGTCTTCGTGCTTTCAGCTTCTTTACAGTGCTGCCTTGTAGCATTCAGGTCAAGCAGCATTGTACAGGGCTATGAAAGAACCAAG
AATGGGCTGCCCTTAGG
dot-bracket secondary structure
...(((.((...((((.((((.((.((((((..((((.(((((((((((.(((..((......)))))))))))))))).))))...)))))).)).)))
)...))))...)).)))
SIMILARITIES| miRBase mmu-mir-103-2: 1e-43 PMRD no hits microPC no hits | UniProt no hits RFAM mir-103: 1e-34 | most similar mature miRNAs |
Identical with: eca-mir-103 from miRBase (MNEST027000) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
