ABOUT THIS RECORDspecies: Prunus armeniaca
miRNA family: MIR157
source: PMRD, original name: par-miR157
Taxonomy by NCBI:
Prunus armeniaca Prunus Amygdaleae Spiraeoideae Rosaceae Rosales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTGACAGAAGAGAGAGAGCAC miRNA* GCTCTGGGGTTTTGTTCA mismatches: 7 bulges: 1 |
pre-miRNA
TTGACAGAAGAGAGAGAGCACGCTAGGCTAGAGGTACAAAAGAGGCATTTTATATGAGAGAGATATGTAGCAATCCTCGCTTTTTAATAACCATGCCTGC
TCTGGGGTTTTGTTCA
dot-bracket secondary structure
..(((((((.....((((((.((..((..((((((......((((.((((((((((.......))))))).)))))))))))))......))..)).)))
)))....)))))))..
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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TTGACAGAAGAGAGAGAGCACGCTAGGCTAGAGGTACAAAAGAGGCATTTTATATGAGAGAGATATGTAGCAATCCTCGCTTTTTAATAACCATGCCTGC
TCTGGGGTTTTGTTCA
dot-bracket secondary structure
..(((((((.....((((((.((..((..((((((......((((.((((((((((.......))))))).)))))))))))))......))..)).)))
)))....)))))))..
SIMILARITIES| miRBase far-MIR529: 0.00009 PMRD par-miR156: 3e-60 microPC miR157: 0.00009 | UniProt no hits RFAM no hits |
Identical with: par-miR156 from PMRD (MNEST051320) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
download this record
