ABOUT THIS RECORDspecies: Mus musculus
miRNA family: mir-147
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTGTGCGGAAATGCTTCTGC miRNA* GGAAACATTTCTGCACCAAC mismatches: 3 bulges: 0 |
pre-miRNA
CAAGAACACTCTATGAATCTAGTGGAAACATTTCTGCACCAACTAGATGTTGATGCCCGTGTGCGGAAATGCTTCTGCTACATTTGTAGGGTTTGCCT
dot-bracket secondary structure
.......(((((((((((.((((((((.(((((((((((((((.....))))........))))))))))).)))))))).)))))))))))......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CAAGAACACTCTATGAATCTAGTGGAAACATTTCTGCACCAACTAGATGTTGATGCCCGTGTGCGGAAATGCTTCTGCTACATTTGTAGGGTTTGCCT
dot-bracket secondary structure
.......(((((((((((.((((((((.(((((((((((((((.....))))........))))))))))).)))))))).)))))))))))......
SIMILARITIES| miRBase mmu-mir-147: 1e-34 PMRD no hits microPC no hits | UniProt no hits RFAM mir-147: 6e-18 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
