miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Picea abies, Picea engelmannii x Picea glauca, Picea glauca, Picea sitchensis, Pinus banksiana, Pinus contorta, Pinus pinaster, Pinus taeda, Pseudotsuga menziesii var. menziesii



ABOUT THIS RECORD

ID: MNEST051335
species: Picea glauca
source: PMRD, original name: pga-miR163

Taxonomy by NCBI:
Picea glauca Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGAAGAAGACTTGGAGCTTCGA

miRNA*
 GGACATCAGCAGACCACAATCCCCGTCGCA

mismatches: 13
bulges: 14
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pre-miRNA
 TGAAGAAGACTTGGAGCTTCGACTTGGACTTACAGTTACAGGAAGGACATCAGCAGACCACAATCCCCGTCGCA

dot-bracket secondary structure
.......(((..(((..(((..(((((((.....))).))))..)))..((....))......)))..)))...


SIMILARITIES
miRBase no hits

PMRD pta-miR163b: 2e-29

microPC no hits		UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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