ABOUT THIS RECORDspecies: Mus musculus
miRNA family: miR-147
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGAAACATTTCTGCACAAAC miRNA* GTGTGCGGAAATGCTTCTGCT mismatches: 4 bulges: 0 |
pre-miRNA
GAACACTCTATGAATCTAGTGGAAACATTTCTGCACAAACTAGATGTTGATGCCAGTGTGCGGAAATGCTTCTGCTACATTTGTAGGGTTTG
dot-bracket secondary structure
....(((((((((((.((((((((.((((((((((((...................)))))))))))).)))))))).)))))))))))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GAACACTCTATGAATCTAGTGGAAACATTTCTGCACAAACTAGATGTTGATGCCAGTGTGCGGAAATGCTTCTGCTACATTTGTAGGGTTTG
dot-bracket secondary structure
....(((((((((((.((((((((.((((((((((((...................)))))))))))).)))))))).)))))))))))...
SIMILARITIES| miRBase mmu-mir-147: 2e-39 PMRD no hits microPC no hits | UniProt no hits RFAM mir-147: 1e-22 | most similar mature miRNAs |
Identical with: mmu-mir-147 from miRBase (MNEST031881) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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