miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Mus musculus, Rattus norvegicus, Peromyscus maniculatus bairdii, Peromyscus polionotus subgriseus



ABOUT THIS RECORD

ID: MNEST005134
species: Mus musculus
miRNA family: miR-147
source: miRNEST

Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGGAAACATTTCTGCACAAAC

miRNA*
 GTGTGCGGAAATGCTTCTGCT

mismatches: 4
bulges: 0
View larger
pre-miRNA
 GAACACTCTATGAATCTAGTGGAAACATTTCTGCACAAACTAGATGTTGATGCCAGTGTGCGGAAATGCTTCTGCTACATTTGTAGGGTTTG

dot-bracket secondary structure
....(((((((((((.((((((((.((((((((((((...................)))))))))))).)))))))).)))))))))))...


SIMILARITIES
miRBase mmu-mir-147: 2e-39

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-147: 1e-22		most similar mature miRNAs

Identical with: mmu-mir-147 from miRBase (MNEST031881)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;