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Species belonging to selected taxon:

Prunus armeniaca, Prunus persica



ABOUT THIS RECORD

ID: MNEST051347
species: Prunus persica
miRNA family: MIR408
source: PMRD, original name: ppe-miR408

Taxonomy by NCBI:
Prunus persica Prunus Amygdaleae Spiraeoideae Rosaceae Rosales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATGCACTGCCTCTTCCCTGGC

miRNA*
 CAGGGAACAGGTAGAGCATGG

mismatches: 3
bulges: 0
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pre-miRNA
 CACTGATAAGACAGGGAACAGGTAGAGCATGGATGGAGTTCCCAACAGAAAAATAGAGCTGTTGTGGCTCTACTCATGCACTGCCTCTTCCCTGGCTGCCG
TCCTC

dot-bracket secondary structure
)...(((.((.(((((((.((((((.(((((..(((((((..((((((..........)))))).)))))))..))))).)))))).))))))).))...)
))...


SIMILARITIES
miRBase ptc-MIR408: 3.0E-10

PMRD ptc-miR408: 3.0E-10

microPC miR408: 2.0E-45		UniProt no hits

RFAM 8MIR408: 4.0E-13

Identical with: miR408 from microPC (MNEST046159)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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