miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Fragaria vesca, Fragaria x ananassa, Prunus armeniaca, Prunus persica



ABOUT THIS RECORD

ID: MNEST051347
species: Prunus persica
miRNA family: MIR408
source: PMRD, original name: ppe-miR408

Taxonomy by NCBI:
Prunus persica Prunus Amygdaleae Spiraeoideae Rosaceae Rosales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATGCACTGCCTCTTCCCTGGC

miRNA*
 CAGGGAACAGGTAGAGCATGG

mismatches: 3
bulges: 0
View larger
pre-miRNA
 ACTGATAAGACAGGGAACAGGTAGAGCATGGATGGAGTTCCCAACAGAAAAATAGAGCTGTTGTGGCTCTACTCATGCACTGCCTCTTCCCTGGCTGCCG
TCCTC

dot-bracket secondary structure
...(((.((.(((((((.((((((.(((((..(((((((..((((((..........)))))).)))))))..))))).)))))).))))))).))...)
))...


SIMILARITIES
miRBase ptc-MIR408: 0.0000000003

PMRD ptc-miR408: 0.0000000003

microPC miR408: 2e-45		UniProt no hits

RFAM MIR408: 0.0000000000004

Identical with: miR408 from microPC (MNEST046159)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record




Liczniki na strone;