miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Mus musculus, Rattus norvegicus, Peromyscus maniculatus bairdii, Cavia porcellus, Peromyscus polionotus subgriseus



ABOUT THIS RECORD

ID: MNEST005142
species: Mus musculus
miRNA family: mir-25
source: miRNEST

Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TATTGCACTTGTCCCGGCCTG

miRNA*
 GGTTGGGATTTGTCGCAATGCT

mismatches: 2
bulges: 1
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pre-miRNA
 CCTTTCTACACAGGTTGGGATTTGTCGCAATGCTGTGTTTCTCTGTATGGTATTGCACTTGTCCCGGCCTGTTGAGTTTG

dot-bracket secondary structure
...(((...((((((((((((..((.(((((((((((........)))))))))))))..)))))))))))).)))....


SIMILARITIES
miRBase mmu-mir-92a-1: 1e-39

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-92: 3e-38		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
download this record
deep sequencing data evidence




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