ABOUT THIS RECORDspecies: Mus musculus
miRNA family: mir-142
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CATAAAGTAGAAAGCACTAC miRNA* ANTGTTTCCTACTTTATGGA mismatches: 2 bulges: 0 |
pre-miRNA
CAGACAGACAGTGCAGTCACCCATAAAGTAGAAAGCACTACTAACAGCACTGGAGGGTGTANTGTTTCCTACTTTATGGATAAGTGCACTGTGGGCTT
dot-bracket secondary structure
.......((((((((.....(((((((((((.(((((.(((...((....))......))).))))).))))))))))).....))))))))......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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CAGACAGACAGTGCAGTCACCCATAAAGTAGAAAGCACTACTAACAGCACTGGAGGGTGTANTGTTTCCTACTTTATGGATAAGTGCACTGTGGGCTT
dot-bracket secondary structure
.......((((((((.....(((((((((((.(((((.(((...((....))......))).))))).))))))))))).....))))))))......
SIMILARITIES| miRBase mml-mir-142: 1e-37 PMRD no hits microPC no hits | UniProt no hits RFAM mir-142: 8e-39 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
Source sequences
download this record
