ABOUT THIS RECORDspecies: Mus musculus
miRNA family: mir-202
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTCCTATGCATATACTTCTTT miRNA* AGAGGTATAGCGCATGGGAAGA mismatches: 1 bulges: 1 |
pre-miRNA
CATTCTCGCTGGCTGTTCCTTTTTCCTATGCATATACTTCTTTGTGGATCTGGTCTAAAGAGGTATAGCGCATGGGAAGATGGAGCAGTGAGATCTTCC
dot-bracket secondary structure
...((((....((((((((.(((((((((((.(((((((((((..((((...)))))))))))))))..))))))))))).))))))))))))......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
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deep sequencing data evidence
CATTCTCGCTGGCTGTTCCTTTTTCCTATGCATATACTTCTTTGTGGATCTGGTCTAAAGAGGTATAGCGCATGGGAAGATGGAGCAGTGAGATCTTCC
dot-bracket secondary structure
...((((....((((((((.(((((((((((.(((((((((((..((((...)))))))))))))))..))))))))))).))))))))))))......
SIMILARITIES| miRBase mmu-mir-202: 3e-35 PMRD no hits microPC no hits | UniProt no hits RFAM mir-202: 4e-25 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
download this record
deep sequencing data evidence
