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Species belonging to selected taxon:

Mus musculus, Rattus norvegicus, Peromyscus maniculatus bairdii, Peromyscus polionotus subgriseus



ABOUT THIS RECORD

ID: MNEST005188
species: Mus musculus
miRNA family: mir-423
source: miRNEST

Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AGCTCGGTCTGAGGCCCCTCA

miRNA*
 AGGGGCAGAGAGCGAGACTTT

mismatches: 3
bulges: 2
View larger
pre-miRNA
 GAAATAAAGGAAGTTAGGCTGAGGGGCAGAGAGCGAGACTTTTCTATTTTCCAAAAGCTCGGTCTGAGGCCCCTCAGTCTTGCTTCCTACCCCG

dot-bracket secondary structure
.......(((((((.((((((((((((..(((.((((.(((((.........))))))))).)))...)))))))))))).)))))))......


SIMILARITIES
miRBase mmu-mir-423: 2e-48

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-423: 2e-39		most similar mature miRNAs

Identical with: rno-mir-423 from miRBase (MNEST032908)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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