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Species belonging to selected taxon:
Populus trichocarpa
ABOUT THIS RECORD
ID:
MNEST051892
species:
Populus trichocarpa
source:
PMRD, original name:
ptc-miRf10070-akr
Taxonomy by NCBI:
Populus trichocarpa
Populus
Saliceae
Salicaceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGGGTCTGGCATGAGTGCCAGA
miRNA*
TGGCATCCGTGCTAAACCTATG
mismatches:
3
bulges:
0
View larger
pre-miRNA
GGGTC
TGGCATCCGTGCTAAACCTATG
TTATTTTGGGCTTGACACACTACCAAGTCCAAGCGCAT
TGGGTCTGGCATGAGTGCCAGA
TCC
dot-bracket secondary structure
(((((
(((((..(((((((.(((((((
(...((((((((((.........)))))))))).))).
))))).)))))))..)))))))
)))
SIMILARITIES
miRBase
no hits
PMRD
ptc-miRf10243-akr
:
0.00002
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
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