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Species belonging to selected taxon:

Mus musculus, Rattus norvegicus, Peromyscus maniculatus bairdii, Peromyscus polionotus subgriseus



ABOUT THIS RECORD

ID: MNEST005194
species: Mus musculus
miRNA family: mir-140
source: miRNEST

Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ACCACAGGGTAGAACCACGGA

miRNA*
 CGGTGGTTTTACCCTATGGTAG

mismatches: 2
bulges: 1
View larger
pre-miRNA
 GTGTCTCTCTCTTGTGTTCCTGCCGGTGGTTTTACCCTATGGTAGGTTACGTCATGCTGTTCTACCACAGGGTAGAACCACGGACAGGATACTGGAGCAC
CCTC

dot-bracket secondary structure
(((.((((.....((((.(((((((.((((((((((((.(((((((..(((......)))))))))).))))))))))))))).)))))))).)))))))
....


SIMILARITIES
miRBase rno-mir-140: 3e-38

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-140: 8e-30		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
deep sequencing data evidence




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