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Species belonging to selected taxon:

Populus deltoides, Populus euphratica, Populus nigra, Populus tremula, Populus tremula x Populus alba, Populus tremula x Populus tremuloides, Populus tremuloides, Populus trichocarpa x Populus nigra, Populus x canadensis, Populus trichocarpa, Populus trichocarpa x Populus deltoides



ABOUT THIS RECORD

ID: MNEST052075
species: Populus trichocarpa
source: PMRD, original name: ptc-miRf10253-akr

Taxonomy by NCBI:
Populus trichocarpa Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CAGGACCCATGAACCTTGGG

miRNA*
 CAAGAACATTGAGGTCCTGAT

mismatches: 5
bulges: 1
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pre-miRNA
 TAAGACCCAAGAACATTGAGGTCCTGATGCAGGACCTATTAGCATTTGGTCCTAACGCCGGACTCAAAAGCATTGTGTCATAACTCAGGACCCATTAGCA
TTGGGTCCTAACGCAGGACCCATGAACCTTGGGTCTTG

dot-bracket secondary structure
(((((((((((.....((.(((((((....((((((((...((....((((((.......(((.(((.....))).))).......)))))).....)).
.))))))))....))))))))).....)))))))))))


SIMILARITIES
miRBase no hits

PMRD ptc-miRf10796-akr: 0.00000003

microPC no hits		UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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