miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Mus musculus, Rattus norvegicus, Peromyscus maniculatus bairdii, Oryctolagus cuniculus, Cavia porcellus, Peromyscus polionotus subgriseus



ABOUT THIS RECORD

ID: MNEST005210
species: Mus musculus
miRNA family: miR-3101
source: miRNEST

Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGTACCATTGACTAAAGCTAG

miRNA*
AGCTTTGGTGGATGGTCTCTG

mismatches: 2
bulges: 0

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pre-miRNA
GGGTAGGTAGCAGGTACCATTGACTAAAGCTAGTANTATAGGCTTGCCTCTAGCTTTGGTGGATGGTCTCTGCTAAGTTCT

dot-bracket secondary structure
(((....(((((((.((((((.(((((((((((......(((....)))))))))))))).)))))).)))))))...)))


SIMILARITIES
miRBase mmu-mir-3101: 1e-36

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
download this record
deep sequencing data evidence





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