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Species belonging to selected taxon:
Mus musculus
,
Rattus norvegicus
,
Peromyscus maniculatus bairdii
,
Oryctolagus cuniculus
,
Cavia porcellus
,
Peromyscus polionotus subgriseus
ABOUT THIS RECORD
ID:
MNEST005210
species:
Mus musculus
miRNA family:
miR-3101
source:
miRNEST
Taxonomy by NCBI:
Mus musculus
Mus
Mus
Murinae
Muridae
Muroidea
Sciurognathi
Rodentia
Glires
Euarchontoglires
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GGTACCATTGACTAAAGCTAG
miRNA*
AGCTTTGGTGGATGGTCTCTG
mismatches:
2
bulges:
0
View larger
pre-miRNA
GGGTAGGTAGCA
GGTACCATTGACTAAAGCTAG
TANTATAGGCTTGCCTCT
AGCTTTGGTGGATGGTCTCTG
CTAAGTTCT
dot-bracket secondary structure
(((....(((((
((.((((((.(((((((((((
......(((....)))))
))))))))).)))))).))))
)))...)))
SIMILARITIES
miRBase
mmu-mir-3101
:
1e-36
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
download this record
deep sequencing data evidence