ABOUT THIS RECORDspecies: Mus musculus
miRNA family: mir-3470
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCACTCTGTAGACCAGGCTGG miRNA* GGCCTGCCTGCGGGCTGAGC mismatches: 2 bulges: 1 |
pre-miRNA
CTAGAGCCTGCTGGCCTGCCTGCGGGCTGAGCTGGACAGTCCTTTTGTTGTTTTTTTTTGAGACAGGGTTTTTCTCTGTAGCCCTGGCTGTCCTGGAACT
CACTCTGTAGACCAGGCTGGCCTCGAACT
dot-bracket secondary structure
...(((...(((((((((.(((((((.((((..((((((((.......((((((.....))))))(((((.........))))).)))))))).....))
)).)))))))..)))))))))))).....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CTAGAGCCTGCTGGCCTGCCTGCGGGCTGAGCTGGACAGTCCTTTTGTTGTTTTTTTTTGAGACAGGGTTTTTCTCTGTAGCCCTGGCTGTCCTGGAACT
CACTCTGTAGACCAGGCTGGCCTCGAACT
dot-bracket secondary structure
...(((...(((((((((.(((((((.((((..((((((((.......((((((.....))))))(((((.........))))).)))))))).....))
)).)))))))..)))))))))))).....
SIMILARITIES| miRBase mmu-mir-3470b: 1e-16 PMRD no hits microPC no hits | UniProt no hits RFAM mir-1937: 0.0000000005 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
