ABOUT THIS RECORDspecies: Sus scrofa
miRNA family: miR-2305
source: miRNEST
Taxonomy by NCBI:
Sus scrofa Sus Suidae Suina Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CGGGGGTGGCGGGGTTGGGGC miRNA* TCCGGCTCCGGCACCATGTC mismatches: 2 bulges: 1 |
pre-miRNA
GGCGGCTCCGGCTCCGGCTCCGGCACCATGTCCCTGCAGTACGGGGCAGAGGAGACGCCCCTCGCCGGCAGTTACGGCGCGGCGGACTCGTTCCCAAAGG
ACTTCGGCTACGGCGTGGAGGAGGAGGAAGAGGAGGCTGCAGCCGGGGGTGGCGGGGTTGGGGCGGGGGCCGG
dot-bracket secondary structure
..(((((((.((((((((((((.((((.((...(((((((..(((((.........)))))((((((((.......)).)))))).(((.((((......
.(((((((....)).))))).....)))))))...))))))).))..)))).)))))))))))).))))))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GGCGGCTCCGGCTCCGGCTCCGGCACCATGTCCCTGCAGTACGGGGCAGAGGAGACGCCCCTCGCCGGCAGTTACGGCGCGGCGGACTCGTTCCCAAAGG
ACTTCGGCTACGGCGTGGAGGAGGAGGAAGAGGAGGCTGCAGCCGGGGGTGGCGGGGTTGGGGCGGGGGCCGG
dot-bracket secondary structure
..(((((((.((((((((((((.((((.((...(((((((..(((((.........)))))((((((((.......)).)))))).(((.((((......
.(((((((....)).))))).....)))))))...))))))).))..)))).)))))))))))).))))))).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q99K70|RRAGC_MOUSE: 0.000000001 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
