miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Sus scrofa, Bos taurus, Canis lupus familiaris, Ovis aries, Ursus americanus, Equus caballus, Bos indicus, Bos sp., Capra hircus



ABOUT THIS RECORD

ID: MNEST005232
species: Sus scrofa
miRNA family: mir-1224
source: miRNEST

Taxonomy by NCBI:
Sus scrofa Sus Suidae Suina Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CACCTGCTCTCTCCTCAGGTC

miRNA*
 CCCGGCGGGGGGGGATTGGTCTG

mismatches: 4
bulges: 2
View larger
pre-miRNA
 CTCAGCCTGTGGCCTATGGAGACCCGGCGGGGGGGGATTGGTCTGAACGTTGCGAACTCTGCTCCCAGCATTTCGCCGCCCCGGCTCCCGGGACACCTGC
TCTCTCCTCAGGTCCCGCGGCGCCAGGTTTCCC

dot-bracket secondary structure
....(((((..(((..(((.((((.((.((((((((...(((......((.(((((...((((...)))).))))).))(((((...)))))..)))..)
))))))))).))))))).)))..))))).....


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




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