miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Sus scrofa, Bos taurus, Ovis aries, Bos indicus, Bos sp., Capra hircus



ABOUT THIS RECORD

ID: MNEST005236
species: Sus scrofa
miRNA family: mir-1677
source: miRNEST

Taxonomy by NCBI:
Sus scrofa Sus Suidae Suina Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGGCTTCAGTAGGAGCAGGAA

miRNA*
 CACCTCTCATAGAAGCTGTG

mismatches: 5
bulges: 1
View larger
pre-miRNA
 TTTAGCGCGGGTGGCTTCAGTAGGAGCAGGAAAGAAAGGAGGGTGGGTGATGCACTGGACAGAAACTGGCACGTGGCCTCTGCTGGGGGCAGTAGTGACT
CCTCGCTCGCATCCTTTCCTTTGAAGGTTTAGGAACCTGATTTCAGAATCACCTCTCATAGAAGCTGTGTTCGTTTG

dot-bracket secondary structure
......((((((((((((.((.((((...((..(((((((..(((((((((((.((((.((((....(((.....)))))))))))..))).........
..)))))))).))))))).(((((((...(((....))).))))))).))..)))).)).)))))))..)))))...


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




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