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Species belonging to selected taxon:

Populus deltoides, Populus euphratica, Populus nigra, Populus tremula, Populus tremula x Populus alba, Populus tremula x Populus tremuloides, Populus tremuloides, Populus trichocarpa x Populus nigra, Populus x canadensis, Populus trichocarpa, Populus trichocarpa x Populus deltoides



ABOUT THIS RECORD

ID: MNEST052416
species: Populus trichocarpa
source: PMRD, original name: ptc-miRf10594-akr

Taxonomy by NCBI:
Populus trichocarpa Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATTCCGTCGGTAAATCCGTTGGT

miRNA*
 CGACTGAATTACGGACGGAAAAG

mismatches: 4
bulges: 0
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pre-miRNA
 TCGGTAGTTACCGACTGAATTACGGACGGAAAAGTGTCCGTCGGTAATTTCGACCTCAAATTACCGACATAAATATTCCGTCGGTAAATCCGTTGGTATT
TAGCGA

dot-bracket secondary structure
(((.(((.(((((((.((.((((.(((((((...(((..(((((((((((.(....)))))))))))))))....))))))).)))).)).))))))).)
)).)))


SIMILARITIES
miRBase no hits

PMRD ptc-miRf12438-akr: 2e-55

microPC no hits		UniProt no hits

RFAM no hits

Identical with: ptc-miRf12095-akr from PMRD (MNEST053917)

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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