miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Populus trichocarpa



ABOUT THIS RECORD

ID: MNEST052643
species: Populus trichocarpa
source: PMRD, original name: ptc-miRf10821-akr

Taxonomy by NCBI:
Populus trichocarpa Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CACTGTGCATGTTAATTGCA

miRNA*
CAATTAACATGCACAGTGAA

mismatches: 0
bulges: 0

View larger
pre-miRNA
GCACTGAACAGTGCAATTAACATGCACAGTGAATGGAAAGCATGATAAAAAAAAATATTAATAAAATTAATACATACTAAAAAAAAAAAAAAGTGTACCGT
GTACACTGTGCATGTTAATTGCACTGTTCAGTG


dot-bracket secondary structure
)((((((((((((((((((((((((((((((.((((...................(((((((...))))))).(((((.............))))).))))
...))))))))))))))))))))))))))))))



SIMILARITIES
miRBase no hits

PMRD ptc-miRf12388-akr: 3.0E-17

microPC no hits
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
download this record





Liczniki na strone;