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Species belonging to selected taxon:
Populus trichocarpa
ABOUT THIS RECORD
ID:
MNEST053364
species:
Populus trichocarpa
source:
PMRD, original name:
ptc-miRf11542-akr
Taxonomy by NCBI:
Populus trichocarpa
Populus
Saliceae
Salicaceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATGTCAAAGAACCATCTCAA
miRNA*
GAGATGGTTCTTTGACATGA
mismatches:
0
bulges:
0
View larger
pre-miRNA
CTTTGATACC
ATGTCAAAGAACCATCTCAA
TCTAAAAACTTAAGTTGTTGGGTT
GAGATGGTTCTTTGACATGA
TAGCAAAG
dot-bracket secondary structure
(((((.((.(
((((((((((((((((((((
(((((.(((....))).)))))))
))))))))))))))))))).
)).)))))
SIMILARITIES
miRBase
ptc-MIR481b
:
0.0000000003
PMRD
ptc-miRf10959-akr
:
0.0000000003
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
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