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Species belonging to selected taxon:
Cynodon dactylon
ABOUT THIS RECORD
ID:
MNEST000538
species:
Cynodon dactylon
miRNA family:
MIR160
source:
miRNEST
Taxonomy by NCBI:
Cynodon dactylon
Cynodon
Eleusininae
Cynodonteae
Chloridoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGCCTGGCTCCCTGTATGCCA
miRNA*
GCGTGCGAGGGGCCAAGCATG
mismatches:
2
bulges:
0
View larger
pre-miRNA
GCAGGAGAAAGAGGTGAAAACGAAGGGAATA
TGCCTGGCTCCCTGTATGCCA
CTCGCACGGCTGCCAACCGGATCGGAGAGCTTCATCGATCGGCGGCCG
CTGCGGCTG
GCGTGCGAGGGGCCAAGCATG
GCCCTCTCTCTCTCTCTCTCTCTCTCTC
dot-bracket secondary structure
...(((((.(((((.((....((((((..((
(((.(((((((.(((((((((
.(((((((((((((.....((((((.((...)).))))))))))))))
.))))).))
))))))).))))))).)))))
.)))).))....))..))))).))))).
SIMILARITIES
miRBase
zma-MIR160e
:
6e-16
PMRD
zma-miR160e
:
6e-16
microPC
miR160
:
0.000000000002
UniProt
no hits
RFAM
mir-160: 0.00000000001
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record