ABOUT THIS RECORDspecies: Bos taurus
miRNA family: mir-450
source: miRNEST
Taxonomy by NCBI:
Bos taurus Bos Bovinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTGGGAACATTTTGCATTCAT miRNA* TTTTGCGATGTGTTCCTAATA mismatches: 4 bulges: 0 |
pre-miRNA
CAAAGAAAGATGCTAAACTATTTTTGCGATGTGTTCCTAATATGTAATCTAAATGTATTGGGAACATTTTGCATTCATAGTTTTGTATCAATCTTC
dot-bracket secondary structure
..((((..(((((.(((((((...(((((.(((((((((((((((.......))))))))))))))).)))))...))))))).)))))..)))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CAAAGAAAGATGCTAAACTATTTTTGCGATGTGTTCCTAATATGTAATCTAAATGTATTGGGAACATTTTGCATTCATAGTTTTGTATCAATCTTC
dot-bracket secondary structure
..((((..(((((.(((((((...(((((.(((((((((((((((.......))))))))))))))).)))))...))))))).)))))..)))).
SIMILARITIES| miRBase bta-mir-450: 3e-47 PMRD no hits microPC no hits | UniProt no hits RFAM mir-450: 1e-31 | most similar mature miRNAs |
Identical with: bta-mir-450 from miRBase (MNEST033381) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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